MiCroKiTS - An Integrated Database of Midbody, Centrosome, Kinetochore, Telomere and Spindle

※ MiCroKiTS Protein Information

Tag

Content

Uniprot Accession

SYCP2_MOUSE; Q9CUU3; A2AJW2; Q1G7B6

MiCroKit ID

MCK-MM-00065

Entrez ID

320558

Genbank Protein ID

NP_796165.2; XP_006500724.1

Genbank Nucleotide ID

NM_177191.3; XM_006500661.1

Protein Name

Synaptonemal complex protein 2; Synaptonemal complex lateral element protein

Gene Name

Sycp2; Scp2

Organism

Mus musculus (Mouse); NCBI Taxa ID= 10090

Localization

Localization	PMID	Orthologs
Kinetochore	14970259	(View/Close)

Organism	Accession	Localization	Identity	E-value	Score
Rattus norvegicus (Rat)	D3ZUW7	Predicted from orthologs	87.48%	0	2624
Microcebus murinus	ENSMICP00000002351	Predicted from orthologs	76.47%	1e-127	454
Macaca mulatta (Rhesus macaque)	F7GUJ8	Predicted from orthologs	72.53%	0	800
Equus caballus (Horse)	F6W907	Predicted from orthologs	69.08%	0	1351
Tursiops truncatus (Atlantic bottle-nosed dolphin)	ENSTTRP00000010753	Predicted from orthologs	68.7%	0	903
Erinaceus europaeus (Western European hedgehog)	ENSEEUP00000010196	Predicted from orthologs	67.83%	1e-160	563
Mustela putorius furo (European domestic ferret)	M3Y6V6	Predicted from orthologs	67.26%	0	1474
Ovis aries (Sheep)	W5Q1K5	Predicted from orthologs	65.68%	0	1457
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel)	I3LW96	Predicted from orthologs	65.29%	0	1840
Ailuropoda melanoleuca (Giant panda)	G1M193	Predicted from orthologs	63.62%	0	1795
Homo sapiens (Human)	Q9BX26	Predicted from orthologs	62.97%	0	1800
Nomascus leucogenys (Northern white-cheeked gibbon)	G1REX7	Predicted from orthologs	62.83%	0	1784
Pan troglodytes (Chimpanzee)	H2QZL7	Predicted from orthologs	62.71%	0	1794
Pongo abelii (Sumatran orangutan)	H2P2G5	Predicted from orthologs	62.54%	0	1794
Tarsius syrichta	ENSTSYP00000008578	Predicted from orthologs	61.88%	0	1150
Bos taurus (Bovine)	F1MV84	Predicted from orthologs	61.76%	0	1767
Gorilla gorilla gorilla (Lowland gorilla)	G3R3L2	Predicted from orthologs	61.74%	0	1749
Dasypus novemcinctus (Nine-banded armadillo)	ENSDNOP00000014058	Predicted from orthologs	61.35%	0	1738
Vicugna pacos	ENSVPAP00000002722	Predicted from orthologs	61.24%	0	1711
Canis familiaris (Dog)	E2RQ30	Predicted from orthologs	61.2%	0	1722
Otolemur garnettii (Small-eared galago)	H0WQI5	Predicted from orthologs	60.76%	0	1715
Sus scrofa (Pig)	F1RJ15	Predicted from orthologs	60.68%	0	1579
Procavia capensis (Cape hyrax)	ENSPCAP00000001100	Predicted from orthologs	60.2%	3e-140	496
Felis catus (Cat)	M3W3I6	Predicted from orthologs	60.07%	0	1704
Loxodonta africana (African elephant)	G3UJ85	Predicted from orthologs	60.04%	0	1698
Cavia porcellus (Guinea pig)	H0VEV8	Predicted from orthologs	59.98%	0	1205
Choloepus hoffmanni	ENSCHOP00000002896	Predicted from orthologs	59.72%	0	847
Pteropus vampyrus	ENSPVAP00000010844	Predicted from orthologs	58.03%	0	1603
Oryctolagus cuniculus (Rabbit)	G1SKY5	Predicted from orthologs	56.66%	0	1519
Ochotona princeps	ENSOPRP00000007039	Predicted from orthologs	55.17%	0	1082
Callithrix jacchus (White-tufted-ear marmoset)	F7IBB8	Predicted from orthologs	54.23%	0	682
Dipodomys ordii	ENSDORP00000007273	Predicted from orthologs	53.47%	0	816
Sorex araneus (Eurasian common shrew)	ENSSARP00000007939	Predicted from orthologs	50.07%	2e-155	546
Gadus morhua (Atlantic cod)	ENSGMOP00000015337	Predicted from orthologs	48.64%	1e-56	219
Tupaia belangeri (Common tree shrew)	ENSTBEP00000008187	Predicted from orthologs	48.49%	0	802
Taeniopygia guttata (Zebra finch)	H1A4U6	Predicted from orthologs	47.95%	1e-136	484
Lepisosteus oculatus (Spotted gar)	W5M6C2	Predicted from orthologs	47.78%	2e-83	308
Anolis carolinensis (Green anole)	G1KCF7	Predicted from orthologs	46.66%	1e-156	551
Monodelphis domestica (Gray short-tailed opossum)	F6X7Q7	Predicted from orthologs	45.39%	0	1139
Sarcophilus harrisii (Tasmanian devil)	G3VSY5	Predicted from orthologs	45.21%	0	1128
Ficedula albicollis (Collared flycatcher)	U3K7X3	Predicted from orthologs	45.1%	2e-152	537
Pelodiscus sinensis (Chinese softshell turtle)	K7GBW5	Predicted from orthologs	42.75%	0	1034
Echinops telfairi (Lesser hedgehog tenrec)	ENSETEP00000008795	Predicted from orthologs	42.36%	0	798
Petromyzon marinus (Sea lamprey)	S4R9E0	Predicted from orthologs	39.11%	8e-69	258
Xiphophorus maculatus (Southern platyfish)	M4AQV8	Predicted from orthologs	38.22%	7e-25	113
Latimeria chalumnae (West Indian ocean coelacanth)	M3XK41	Predicted from orthologs	37.44%	6e-169	592
Xenopus tropicalis (Western clawed frog)	F6YH78	Predicted from orthologs	37.11%	9e-99	359
Gallus gallus (Chicken)	E1BXE7	Predicted from orthologs	36.24%	0	861
Anas platyrhynchos (Domestic duck)	U3J345	Predicted from orthologs	36.2%	0	797
Danio rerio (Zebrafish)	F1R626	Predicted from orthologs	35.69%	1e-62	239
Ornithorhynchus anatinus (Duckbill platypus)	F7EJ03	Predicted from orthologs	32.76%	0	691
Ciona savignyi (Pacific transparent sea squirt)	H2Z9C5	Predicted from orthologs	29.38%	0.000000004	61.2
Selaginella moellendorffii (Spikemoss)	D8QNY5	Predicted from orthologs	28.43%	0.00000001	60.1
Musa acuminata (Wild banana)	M0SQL7	Predicted from orthologs	27.87%	0.13	36.2
Puccinia graminis (Black stem rust fungus)	E3KEA7	Predicted from orthologs	26.64%	0.015	38.5
Melampsora larici-populina (Poplar leaf rust fungus)	F4R386	Predicted from orthologs	26.32%	0.066	36.6
Ciona intestinalis (Transparent sea squirt)	F6TRT4	Predicted from orthologs	25.63%	0.00000002	58.2
Oryza sativa subsp. indica (Rice)	BGIOSGA032194-PA	Predicted from orthologs	25.32%	0.035	38.5
Oryza sativa subsp. japonica (Rice)	OS07T0649300-00	Predicted from orthologs	25.26%	0.34	35
Trichoderma reesei	G0R6P4	Predicted from orthologs	25%	0.64	32.7
Caenorhabditis elegans	O02103	Predicted from orthologs	23.66%	5.9	31.2
Trichoderma virens	G9MKU8	Predicted from orthologs	23.26%	3	30.8
Medicago truncatula (Barrel medic)	G7JSQ4	Predicted from orthologs	21.9%	0.46	34.7
Glycine max (Soybean)	K7LHF7	Predicted from orthologs	21.62%	0.19	37
Physcomitrella patens	PP1S22_119V6.1	Predicted from orthologs	20.1%	0.04	38.1

Functional Description

Major component of the axial/lateral elements of synaptonemal complexes (SCS) during meiotic prophas(View all)

PTM
Count: 0

Sequence
(Fasta)

MPVRPDLQQL EKCIDDALRK NDFKPLLALL QIDICEDVKI KCSKQFLRKL DDLICRELNK KDIQTVSSIL ISIGRCSKNI 80
FILGQAGLQT MIKQGLVQKM VSWFENSKEI ILNQQQSKDE AVMNMIEDLF DLLMVIYDIS DEGKNQVLES FIPQICALVI 160
DSRVNFCIQQ EALKKMNLML DRIPQDANKI LSNQEMLTLM SNMGERILDV GDYELQVGIV EALCRMTTEK RRQELAYEWF 240
SMDFIANAFK EIKDCEFETD CRIFLNLVNG ILGDKRRVYT FPCLSAFLGK YELQIPSDEK LEEFWIDFNL GSHTLSFYIA 320
GDEEDHQWEA VTVPEEKVQM YNIEVRESKK LLTLTLKNIV KISKKEGKEL LFYFDESLEI TNVTKKVFGG NKYKEFTRKQ 400
GISVAKTSIH VLFDASGSQI LVPESQPSPV KENLIHLKEK SDIQKKLVNP LELGNSSSQD EITTPSRKKM SEASMIVPDT 480
DRYTVRSPIL LINTSTPRRS REPLQAINSV EKAVSKTSES GMDYAASPKS RQSDGRKRWN NRANHNKTTA VIQNKQYEDN 560
ESPDQNFNEI EDTLSNVSSA VGKVDKPVLP GVLDISKNTT HSRWACWTPV TTIKLCNNQR SRALPGDTCT QDTGVNKKCT 640
KQKSVSDDDS EETQKGKYSK DVIKCNKSDE AEFCERNIQE QNHPKYSQKK NTANAKKSDW HIESETTYKS VLLNKTTEES 720
LIYKKTCVLS KDVNTTICDK SPSRKSKRNH TKSRKELMSE LTSCELEEIP VRENSKGKRF TGASESLINQ ISRRYNPSDS 800
MMSTRKLKEP QDGSGFSKKP DLQFNKVQRK SYRKLKATVV NVTSECPLDD VYNFSLNGAD EPVIKLGIQE FQATTREASM 880
DNSLKLVKNH DEHDPFLKTK DKRMLSYEKK TLLSDTETEC GCDDSKTDIS WLKEPKTKRL MDYSRNKNTT KYKSRKSRSS 960
MEKGQPRPTM VLNKNSMKND YEVVVDGRTR LPRRATKTKK NYKDLSTSES ESESEKECSY LFKDKLPTKE ETIHSRAQTK 1040
KLPEKQQKVF NSEALKGQPS EEQKNSSRLR EGREDSLCLS SASVSRSSSS VEVMRCTEKI TERDFTQDYD YITKSLSPYP 1120
KAPSPEFLNG NNSVVGRGQS PRISETSAMC VRKSYSPASG PPFSPRHTPT KNNSVVNMKK ANSVINNQRT QHCNSYSDVS 1200
SNSSEKLYME PESPESCDNH MQNKREGNHA ASPLSLSSEK IEKMWFDMPS ENTHVSGPSQ RGSKRRMYLE DDELSNSNEA 1280
EVEEAEEREH LLSKKRCQWE NSDQHTFKTS LSTPDFSVPK DWQQELQGAG MFYDNISSDY KRKTDSQHKI MDDFTTKTLK 1360
LTQQHLMAMT SQAQGRRDEN VEKFQVTLLD ELEKVEKDSQ TLRDLEKELV DIEEKLVQKM RAYHRCERER FRVLKTSLDK 1440
SFLVYNSVYE ESVFTSEMCL MKANMKMLQD KLLKEMHEEE VLNIRRGLQS LFKAHEGNDA

※ MiCroKiTS Protein Information

Functional Description

Fasta Sequence